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PDCMFinder
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pdcm-etl
ETL process for the PDCM project
Apache License 2.0
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Explicitly set python location so workers have the same version as the master
#345
mauroz77
closed
5 months ago
1
Pyspark and luigi upgrade
#344
mauroz77
closed
5 months ago
1
Develop
#343
mauroz77
closed
5 months ago
1
Develop
#342
mauroz77
closed
5 months ago
1
tests refactoring
#341
mauroz77
closed
5 months ago
1
Fixing failing tests
#340
mauroz77
closed
5 months ago
1
Develop
#339
mauroz77
closed
5 months ago
1
Develop
#338
mauroz77
closed
6 months ago
1
Create get_parents_tree and get_children_tree in `pdcm_api` so the endpoints in `PostgREST` can use them without issues
#337
mauroz77
closed
6 months ago
2
Develop
#336
mauroz77
closed
6 months ago
1
Develop
#335
mauroz77
closed
6 months ago
1
Update ETL to read the new fields (in vitro models) that were missing
#334
mauroz77
closed
7 months ago
1
Develop
#333
mauroz77
closed
5 months ago
1
Fix bug making model be null in patient_sample
#332
mauroz77
closed
7 months ago
1
Database schema update regarding MI implementation of In Vitro Models
#331
mauroz77
closed
7 months ago
1
Develop
#330
mauroz77
closed
7 months ago
1
Database documentation
#329
mauroz77
closed
7 months ago
1
Develop
#328
mauroz77
closed
7 months ago
1
Develop
#327
mauroz77
closed
7 months ago
1
Develop
#326
mauroz77
closed
7 months ago
1
Fix bug that was making dataset_available to miss treatment entries
#325
mauroz77
closed
7 months ago
1
Develop
#324
mauroz77
closed
8 months ago
1
Add WCMC to the providers to process
#323
mauroz77
closed
8 months ago
1
Develop
#322
mauroz77
closed
10 months ago
1
Develop
#321
mauroz77
closed
10 months ago
1
Process publication data for Cell Models
#320
mauroz77
closed
10 months ago
1
Process publication data for Organoids and Cell Models
#319
mauroz77
opened
10 months ago
0
Develop
#318
mauroz77
closed
10 months ago
1
Handle missing changes of name of type `biomarker` to `bio markers`
#317
mauroz77
closed
10 months ago
1
Update Cosmic links generation#315
#316
mauroz77
closed
10 months ago
1
Update Cosmic links generation
#315
mauroz77
opened
10 months ago
1
Add `marker_type` to immunemarker_molecular_data and related views
#314
mauroz77
closed
10 months ago
1
Develop
#313
mauroz77
closed
10 months ago
1
Develop
#312
mauroz77
closed
11 months ago
1
Develop
#311
mauroz77
closed
11 months ago
1
Develop
#310
mauroz77
closed
11 months ago
1
Add support to immunemarker data
#309
mauroz77
opened
11 months ago
3
Develop
#308
mauroz77
closed
11 months ago
1
Fix custom treatment type list when patient treatment status is null
#307
mauroz77
closed
11 months ago
1
Develop
#306
mauroz77
closed
11 months ago
1
Revert changes making platform_id lowercased when joining with other df.
#305
mauroz77
closed
11 months ago
1
Develop
#304
mauroz77
closed
11 months ago
1
Fix bug in quality assurance information
#303
mauroz77
closed
11 months ago
1
Add custom_treatment_type_list to search_index to fix filter
#302
mauroz77
closed
11 months ago
1
Add providers CUIMC, HKU, and PMLB-Organoid to list of providers to process
#301
mauroz77
closed
11 months ago
1
Missing OncoMX link for BRCA2
#300
mauroz77
opened
11 months ago
0
Develop
#299
mauroz77
closed
11 months ago
1
Fix molchar type for biomarkers in transformation for available_molec…
#298
mauroz77
closed
11 months ago
1
Develop
#297
mauroz77
closed
11 months ago
1
POC: Endpoint to return png images from the database
#296
mauroz77
opened
11 months ago
0
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