PDX Finder performs integration, standardization, analysis and visualization of the complex and diverse data associated with PDX mouse models for the cancer community.
As a developer, I want the ETL to process the [provider]_metadata-model_image.tsv and [provider]_metadata-image_study.tsv files and store that data in suitable db tables, so when a model is retrieved, it also contains information about the images.
Changes include:
[x] New table model_image and model_study.
[x] New tasks (extraction/transformation) for model_image and image_study.
[x] Add a column in the search_index table with the image-related information in a model.
Acceptance Criteria
[x] search_index endpoint contains a new attribute with image-related information in a model.
mauroz77
commented
1 year ago
As a developer, I want the ETL to process the
[provider]_metadata-model_image.tsvand[provider]_metadata-image_study.tsvfiles and store that data in suitable db tables, so when a model is retrieved, it also contains information about the images.Changes include:
model_imageandmodel_study.search_indextable with the image-related information in a model.Acceptance Criteria
search_indexendpoint contains a new attribute with image-related information in a model.