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PDCMFinder / pdxfinder

PDX Finder performs integration, standardization, analysis and visualization of the complex and diverse data associated with PDX mouse models for the cancer community.
https://www.pdxfinder.org/
Apache License 2.0
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Accommodate new data type - gene fusion #245

Open zperova opened 4 years ago

zperova commented 4 years ago

Description:

As a user, I want to see gene fusion data provided for PDXFinder models.

Jira ticket PDXI-731

created a new data collection file we need to create additional attribute and following actions to be able to load data https://cancer.sanger.ac.uk/cosmic/help/fusion/summary#summary_fusion_genomic_details https://docs.google.com/spreadsheets/d/1ONNsacWoJPO-qkmVUWk7xr5Npb7rEHx_WNdOV2nxS3I/edit?usp=sharing

discuss with Csaba Halmagyi to agree on next steps

Acceptance criteria:

zperova commented 2 years ago

@zperova check if we already have the template, then check pilot dataset, then make a ticket for ETL process and way to display and filter in the portal