PEtab-dev / libpetab-python

Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
14 stars 6 forks source link

Handle default for `plotTypeData` in validation of visualization tables #213

Closed dweindl closed 1 year ago

dweindl commented 1 year ago

Default is MeanAndSD, but petablint currently fails with:

Unknown plotTypeData: {nan}. Must be one of ['MeanAndSD', 'MeanAndSEM', 'replicate', 'provided']

see e.g. https://github.com/Benchmarking-Initiative/Benchmark-Models-PEtab/actions/runs/5576504114/jobs/10187882534?pr=187