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PEtab-dev / libpetab-python

Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
14 stars 5 forks source link

PEtab v1 to v2 converter #281

Closed dweindl closed 5 days ago

dweindl commented 1 week ago

Converter for PEtab v1 problems to PEtab v2 problems.

Allows converting a set of PEtab v1 files to v2 files or creating a petab.v2.Problem from v1 yaml file.

To be extended/adapted as v2 matures.

Closes #272.

codecov-commenter commented 1 week ago

Codecov Report

Attention: Patch coverage is 79.51807% with 17 lines in your changes missing coverage. Please review.

Project coverage is 74.01%. Comparing base (9398e77) to head (09a8cc3).

Files Patch % Lines
petab/v2/petab1to2.py 82.08% 7 Missing and 5 partials :warning:
petab/v2/problem.py 68.75% 4 Missing and 1 partial :warning:
Additional details and impacted files ```diff @@ Coverage Diff @@ ## develop #281 +/- ## =========================================== + Coverage 72.92% 74.01% +1.08% =========================================== Files 72 73 +1 Lines 4717 4798 +81 Branches 1012 1029 +17 =========================================== + Hits 3440 3551 +111 + Misses 983 953 -30 Partials 294 294 ```

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