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PEtab-dev / libpetab-python

Python package for working with PEtab files
https://libpetab-python.readthedocs.io
MIT License
14 stars 6 forks source link

Add command line interface for plotting #98

Closed dweindl closed 2 years ago

codecov-commenter commented 2 years ago

Codecov Report

Merging #98 (171115e) into develop (7c5305a) will increase coverage by 0.06%. The diff coverage is 76.00%.

Impacted file tree graph

@@             Coverage Diff             @@
##           develop      #98      +/-   ##
===========================================
+ Coverage    79.85%   79.91%   +0.06%     
===========================================
  Files           26       27       +1     
  Lines         2953     2978      +25     
  Branches       719      722       +3     
===========================================
+ Hits          2358     2380      +22     
  Misses         420      420              
- Partials       175      178       +3
Impacted Files Coverage Δ
petab/visualize/cli.py 76.00% <76.00%> (ø)
petab/visualize/plotting.py 86.19% <0.00%> (+0.33%) :arrow_up:
petab/visualize/plot_data_and_simulation.py 85.29% <0.00%> (+1.96%) :arrow_up:

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dweindl commented 2 years ago

Could add a cell to a notebook to show how the same plot can be generated with either Python code or this CLI

Agreed. Will keep that for after #89 (notebooks are currently failing).