Ancestry tools & reports

PGScatalog / pgscatalog_utils

(superseded by pygscatalog) Utilities for working with PGS Catalog API and scoring files

Apache License 2.0

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Closed smlmbrt closed 1 year ago

smlmbrt commented 1 year ago

Initial commit implements:

Read PCA data
Assign populations using reference data (and sample filtering) and PCs using: - Mahalanobis distance - Random Forest classifier
Basic plotting in notebook