hier comparae

[PhilipDeegan]

some of #888 isolated for roch

Summary by CodeRabbit

• New Features

  • Introduced new functions for enhanced floating-point comparisons and error handling.
  • Added methods for detailed dataset comparisons in FieldData and ParticleData classes.

• Bug Fixes

  • Improved error handling in module imports and adjusted error messages in the LoadBalancer class.

• Refactor

  • Renamed and restructured functions for better clarity and functionality.
  • Enhanced the PatchHierarchy class with a new deep copy method.

• Documentation

  • Updated method signatures to reflect new parameters and functionality across various classes.

[coderabbitai[bot]]

📝 Walkthrough

## Walkthrough The changes in this pull request involve several modifications across various files in the `pyphare` library. Key updates include renaming and re-implementing floating-point comparison functions, deleting a simulation configuration file, enhancing error handling in user input functions, modifying error messages in the `LoadBalancer` class, and introducing new parameters and methods in hierarchy-related classes. Additionally, several classes related to data handling have been enhanced with new comparison methods and improved functionality. ## Changes | File Path | Change Summary | |---------------------------------------------|---------------------------------------------------------------------------------------------------------------------| | `pyphare/pyphare/core/phare_utilities.py` | Renamed `assert_fp_any_all_close` to `any_fp_tol`, which now returns tolerances. Added `fp_any_all_close` function for array comparison. Indentation fix in `is_fp32`. | | `pyphare/pyphare/pharein/examples/job.py` | Deleted file containing simulation configuration for a computational physics framework. | | `pyphare/pyphare/pharein/init.py` | Modified `get_user_inputs` to raise a `RuntimeError` if module import fails. | | `pyphare/pyphare/pharein/load_balancer.py`| Adjusted error messages in `LoadBalancer` class's `__post_init__` method from f-strings to string literals. | | `pyphare/pyphare/pharesee/hierarchy/fromh5.py` | Updated `get_all_available_quantities_from_h5` to include a new `hier` parameter for enhanced flexibility. | | `pyphare/pyphare/pharesee/hierarchy/hierarchy.py` | Added `__deepcopy__` method to `PatchHierarchy` class for deep copying instances. | | `pyphare/pyphare/pharesee/hierarchy/hierarchy_utils.py` | Updated `EqualityReport` class and modified `hierarchy_compare` for detailed mismatch reporting. New parameters added to `flat_finest_field` functions and introduced `single_patch_for_LO`. | | `pyphare/pyphare/pharesee/hierarchy/patchdata.py` | Enhanced `PatchData`, `FieldData`, and `ParticleData` classes with new comparison methods. | | `pyphare/pyphare/pharesee/particles.py` | Modified `Particles` class with size comparison in `__eq__`, added `__ne__`, and updated `select` method for box dimensionality checks. | ## Possibly related PRs - **#862**: The changes in this PR focus on assertions within the SAMRAI framework, which may relate to the floating-point comparisons and assertions modified in the main PR, particularly in how assertions are handled during different build types. - **#867**: This PR modifies the logic in the `single_patch_per_level_per_pop_from` function in `particles.py`, which may involve similar data handling and comparisons as the new `fp_any_all_close` function introduced in the main PR.

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[PhilipDeegan]

closes #864