The host gene pages do not show Physical Interaction annotations that involve the host gene: this information is only shown on the pathogen gene pages, but it should be shown on both pathogen and host gene pages.
For example, given the following physical_interaction annotation:
The display is correct on the pathogen gene page for MGG_08054 (PHIG:294):
But the corresponding host gene page (TPR1 of Oryza sativa, PHIG:290) does not display any Physical Interaction annotations.
Here's a mockup of what we expect to see on the host gene page:
Basically, whenever a physical_interaction annotation is found in the JSON export, the interaction must be displayed on the gene page for the gene in the gene property, and on the gene page for all genes listed in the interacting_genes property (though I think there will only ever be one gene in the interacting_genes array).
Note also that when the gene of the gene page is in the interacting_genes array, then the "Interacting organism" column group must be populated with the gene (and organism) from the gene property of the physical_interaction annotation.
The host gene pages do not show Physical Interaction annotations that involve the host gene: this information is only shown on the pathogen gene pages, but it should be shown on both pathogen and host gene pages.
For example, given the following
physical_interaction
annotation:The display is correct on the pathogen gene page for MGG_08054 (PHIG:294):
But the corresponding host gene page (TPR1 of Oryza sativa, PHIG:290) does not display any Physical Interaction annotations.
Here's a mockup of what we expect to see on the host gene page:
Basically, whenever a
physical_interaction
annotation is found in the JSON export, the interaction must be displayed on the gene page for the gene in thegene
property, and on the gene page for all genes listed in theinteracting_genes
property (though I think there will only ever be one gene in theinteracting_genes
array).Note also that when the gene of the gene page is in the
interacting_genes
array, then the "Interacting organism" column group must be populated with the gene (and organism) from thegene
property of thephysical_interaction
annotation.