PHI-base / PHI5_web_display

PHI5_web_display will allow to display PHI-Canto data
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Missing host phenotypes for newly loaded genes #70

Closed jseager7 closed 1 year ago

jseager7 commented 1 year ago

The following PHIG IDs have at least one Host Phenotype annotation in the PHI-Canto JSON export, but there are no host phenotypes shown on the gene pages, just an empty section:

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jseager7 commented 1 year ago

@Molecular-Connections The Host Phenotype section is shown now, but the host genotype name is incorrectly formatted for both PHIG:359 and PHIG:361.

PHIG:359 has "HSP90other Knockdown", which should be formatted as "HSP90 (other) [Knockdown]".

PHIG:361 has "SGT1other Knockdown", which should be formatted as "SGT1 (other) [Knockdown]".

As a reminder, the genotype display name should follow this format:

<allele> (<type>) [<expression>]
Where the values correspond to those shown in the genotype details pop-up. The example below is from PHIG:359. Gene Allele Type Expression
HSP90 HSP90 other Knockdown
jseager7 commented 1 year ago

See also: #76

jseager7 commented 1 year ago

The previous display problems are fixed now.

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