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PHI-base curation
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Check usage of 'GO:0048046 apoplast' in curated sessions #98

Closed CuzickA closed 2 years ago

CuzickA commented 2 years ago

It may need updating to 'GO:0140593 host apoplast' in cases where the pathogen gene product is functioning within host apoplast, rather than a host gene product functioning within apoplast.

https://www.ebi.ac.uk/QuickGO/term/GO:0140593 https://www.ebi.ac.uk/QuickGO/term/GO:0048046

@jseager7 please could you pull out any sessions annotated with 'GO:0048046 apoplast'

jseager7 commented 2 years ago

@CuzickA I'll have to make a new export before I can check this because the current one is pretty outdated.

jseager7 commented 2 years ago

@CuzickA Sorry about the delay. Here's the list of publications.

You can use the checkbox next to each PMID to track which ones you've reviewed, if you like.

Note that I searched for any session where 'apoplast' (GO:0048046) was annotated as a primary term or an extension.

CuzickA commented 2 years ago

Thanks @jseager7

CuzickA commented 2 years ago

All now checked and changed, closing ticket