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Pathogen-Host Interaction Phenotype Ontology
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host defense induced lesion formation phenotype #351

Closed ValWood closed 2 years ago

ValWood commented 3 years ago

'pathogen host interaction host lesion formation phenotype'

definition "A phenotype that affects the process of host tissue death causing a host lesion induced by either the pathogen directly killing host tissue (e.g. cell wall degradation), or the host activating its own cell death pathways in defense."

so I think this one needs children for the 2 types host defense induced lesion formation phenotype

and a term to describe the pathogen directly killing host tissue.

CuzickA commented 2 years ago

This term may be altered once be made a decision on how to proceed in ticket #306

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so I think this one needs children for the 2 types host defense induced lesion formation phenotype

and a term to describe the pathogen directly killing host tissue.

We currently have more general terms 'absence/presence of pathogen-associated host lesions' for when it is unknown whether the host defence or the pathogen is directly causing the lesion.

ValWood commented 2 years ago

I see, yes, ignore. I wanted to be able to select the defense inducd, or effector mediated before presence or absence. I forgot that sometimes we don't know this. Close?