PHI-base / phipo

Pathogen-Host Interaction Phenotype Ontology
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NTR: sensitive to oxidative stress #428

Closed CuzickA closed 5 months ago

CuzickA commented 5 months ago

For https://github.com/PHI-base/curation/issues/196

Preferred term label

sensitive to oxidative stress

Textual definition

A growth phenotype which describes the sensitivity of individuals or populations after exposure to an oxidative stress. Typically, individuals or populations are deemed sensitive to a stress if they grow when exposed to the stress at an intensity at which an individual or population of wild type cell(s) stop growing (and may die).

Suggested parent term

sensitive to stress

CuzickA commented 5 months ago

Similar issue here as mentioned in #427

image

or do we need a NTR: sensitive to paraquat

Please let me know what you think @ValWood

CuzickA commented 5 months ago

An additional issue

In FYPO image

'sensitive to hydrogen peroxide' is a child of 'sensitive to oxidative stress'

However, in PHIPO 'sensitive to hydrogen peroxide' is under the 'increased sensitivity to chemical' branch and 'NTR: sensitive to oxidative stress' will be under the 'sensitive to stress' branch.

CuzickA commented 5 months ago

See comments in #427

NTR: sensitive to oxidative stress 1f1b69c

NTR: sensitive to paraquat - no need for this at the moment

Added 'sensitive to oxidative stress' as an additional parent to 'sensitive to hydrogen peroxide' fefebb1

image image