R package with advanced diagnostics to evaluate a Stock Synthesis model. Diagnostics include residual analyses, hindcasting and cross-validation techniques, and retrospective analyses.
Changes related to #50 caused errors in the test-plotJABBA..r: intended filenames of the written plot PNG were not found when the test script expects it to be true.
Ran test-plotJABBA.r data setup and the first ss3diags::SSplotJABBAres manually on R console. The plot does get outputted, path <- file.path(tempdir(),"test-runs") is created, however file.exists(file.path(path, paste0(filenameprefix"jabbaresidual.png"))) is FALSE (which should be TRUE).
Looking at the temp dir, the written file was saved as a default tempfile.
The checks errors began with commit 072c49df956eaee9b51ae23026d29ea213ee11db, and relate to this issue. Looking at the changes for SSplotJABBAres, the par is set to TRUE.
Changes related to #50 caused errors in the
test-plotJABBA..r: intended filenames of the written plot PNG were not found when the test script expects it to be true.Ran
test-plotJABBA.rdata setup and the firstss3diags::SSplotJABBAresmanually on R console. The plot does get outputted,path <- file.path(tempdir(),"test-runs")is created, howeverfile.exists(file.path(path, paste0(filenameprefix"jabbaresidual.png")))is FALSE (which should be TRUE).Looking at the temp dir, the written file was saved as a default tempfile.
The checks errors began with commit 072c49df956eaee9b51ae23026d29ea213ee11db, and relate to this issue. Looking at the changes for SSplotJABBAres, the
paris set to TRUE.Reverting
parto FALSE fixes this issue.