R package with advanced diagnostics to evaluate a Stock Synthesis model. Diagnostics include residual analyses, hindcasting and cross-validation techniques, and retrospective analyses.
The miny and ylim arguments in SSplotRunstest and SSplotJABBAres were inconsistent in how they actually worked. I changed the SSplotRunstest function so you no longer depend on miny to adjust y-axis limits. I added in the ylim parameter to match how it is done in SSplotJABBAres. The default for ylim = "default" and will make the y-axis range (-1,1) but if user wants to specify the y-axis range they can easily adjust the ylim parameter (ie set ylim = (-.5,.5)). This improves the usability and consistency of the function and addresses issue #46.
The miny and ylim arguments in SSplotRunstest and SSplotJABBAres were inconsistent in how they actually worked. I changed the SSplotRunstest function so you no longer depend on miny to adjust y-axis limits. I added in the ylim parameter to match how it is done in SSplotJABBAres. The default for ylim = "default" and will make the y-axis range (-1,1) but if user wants to specify the y-axis range they can easily adjust the ylim parameter (ie set ylim = (-.5,.5)). This improves the usability and consistency of the function and addresses issue #46.