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_tkinter.TclError: couldn't connect to display "localhost:12.0" #3

Open unclesho opened 9 years ago

unclesho commented 9 years ago

trace: std=.1.000000 has illegal value for SNPs[:][44] Two or more individuals have the same phenotype value. If the data is censored, an appropriate censorship model is needed before the data is passed to WarpedLMM. Optimization restart 1/3, f: -103.9284 Optimization restart 2/3, f: -103.2122 Optimization restart 3/3, f: -103.9237 WARNING:root:NaN beta value seen, may be due to an SNC (a constant SNP) Iteration: 1, significant SNPs: 51, included SNPs: 0, heritability: 0.4054, f: 103.928415209 Two or more individuals have the same phenotype value. If the data is censored, an appropriate censorship model is needed before the data is passed to WarpedLMM. Optimization restart 1/3, f: -103.2131 Optimization restart 2/3, f: -108.4375 Optimization restart 3/3, f: -137.6876 WARNING:root:NaN beta value seen, may be due to an SNC (a constant SNP) Iteration: 2, significant SNPs: 0, included SNPs: 1, heritability: 1.0000, f: 137.687583974 WARNING:root:NaN beta value seen, may be due to an SNC (a constant SNP) Traceback (most recent call last): File "/usr/local/lib/python2.7/runpy.py", line 162, in _run_module_as_main "main", fname, loader, pkg_name) File "/usr/local/lib/python2.7/runpy.py", line 72, in _run_code exec code in run_globals File "/usr/local/lib/python2.7/site-packages/warpedlmm/main.py", line 82, in m.plot_warping() File "/usr/local/lib/python2.7/site-packages/warpedlmm/warpedlmm.py", line 209, in plot_warping self.warping_function.plot(self.warping_params, self.Y_untransformed.min(), self.Y_untransformed.max()) File "/usr/local/lib/python2.7/site-packages/warpedlmm/util/warping_functions.py", line 37, in plot plt.figure() File "/usr/local/lib/python2.7/site-packages/matplotlib/pyplot.py", line 435, in figure kwargs) File "/usr/local/lib/python2.7/site-packages/matplotlib/backends/backend_tkagg.py", line 81, in new_figure_manager return new_figure_manager_given_figure(num, figure) File "/usr/local/lib/python2.7/site-packages/matplotlib/backends/backend_tkagg.py", line 89, in new_figure_manager_given_figure window = Tk.Tk() File "/usr/local/lib/python2.7/lib-tk/Tkinter.py", line 1745, in init** self.tk = _tkinter.create(screenName, baseName, className, interactive, wantobjects, useTk, sync, use) _tkinter.TclError: couldn't connect to display "localhost:12.0"

unclesho commented 9 years ago

Request for additional features:

  1. Switch to turn on/off plotting
  2. Switch to turn on/off genotype-phenotype association

Thanks!

bhosaleshivam commented 3 years ago

Traceback (most recent call last): File "FINAL.py", line 943, in train() File "FINAL.py", line 906, in train save_img([mos, frame, base, fake, raw], ['Input', 'Frame', 'base', 'SR', 'Ground Truth'], epoch) File "FINAL.py", line 934, in save_img plt.savefig(path) File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/site-packages/matplotlib/pyplot.py", line 688, in savefig fig = gcf() File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/site-packages/matplotlib/pyplot.py", line 578, in gcf return figure() File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/site-packages/matplotlib/pyplot.py", line 525, in figure **kwargs) File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/site-packages/matplotlib/backend_bases.py", line 3218, in new_figure_manager return cls.new_figure_manager_given_figure(num, fig) File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/site-packages/matplotlib/backends/_backend_tk.py", line 1008, in new_figure_manager_given_figure window = Tk.Tk(className="matplotlib") File "/home/17id92r01/conda/ls/envs/py3/lib/python3.5/tkinter/init.py", line 1876, in init self.tk = _tkinter.create(screenName, baseName, className, interactive, wantobjects, useTk, sync, use) _tkinter.TclError: couldn't connect to display "localhost:12.0"