search

PMCC-BioinformaticsCore / janis-core

Core python modules for Janis Pipeline workflow assistant
GNU General Public License v3.0
4 stars 9 forks source link

Allow empty containers by flag #8

Closed illusional closed 4 years ago

illusional commented 4 years ago

Fixes https://github.com/PMCC-BioinformaticsCore/janis/issues/15.

Current build is failing due to an updated WDLGen dependency not being released yet.

codecov-io commented 4 years ago

Codecov Report

Merging #8 into master will decrease coverage by 0.06%. The diff coverage is 72.22%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master       #8      +/-   ##
==========================================
- Coverage   75.89%   75.83%   -0.07%     
==========================================
  Files          57       57              
  Lines        5510     5537      +27     
==========================================
+ Hits         4182     4199      +17     
- Misses       1328     1338      +10
Impacted Files Coverage Δ
janis_core/code/codetool.py 48.38% <ø> (ø)
janis_core/tests/test_python_tool.py 89.36% <ø> (ø)
janis_core/tool/commandtool.py 70.38% <ø> (ø)
janis_core/tool/tool.py 69.69% <ø> (ø)
janis_core/translations/__init__.py 88.00% <ø> (ø)
janis_core/workflow/workflow.py 66.37% <ø> (ø)
janis_core/translations/cwl.py 65.41% <50.00%> (-0.79%) :arrow_down:
janis_core/translations/wdl.py 78.33% <75.00%> (-0.16%) :arrow_down:
janis_core/tests/test_translation_cwl.py 100.00% <100.00%> (ø)
janis_core/tests/test_translation_wdl.py 98.37% <100.00%> (ø)
... and 1 more

Continue to review full report at Codecov.

Legend - Click here to learn more Δ = absolute <relative> (impact), ø = not affected, ? = missing data Powered by Codecov. Last update 03d26da...8c4f5fa. Read the comment docs.

illusional commented 4 years ago

Completed.