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PMCC-BioinformaticsCore / janis

[Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
https://janis.readthedocs.io/
GNU General Public License v3.0
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cwl workflow inputs issue #12

Closed matthdsm closed 4 years ago

matthdsm commented 4 years ago

Hi,

When "translating" a workflow to CWL, only the required tool inputs get gathered in the *-inp.yaml and the workflow inputs are omitted. Is it possible to add the workflow AND omit the tool inputs if they are already defined in the workflow?

Thanks M

matthdsm commented 4 years ago

nvm, the issue was with in my code. Sorry to bother.

M