1) NMF_helper - added function extract.features, which uses the extractFeatures function from NMF to select the features which most contribute to each metagene.
2) NMF_summary - added Kaplan meier plots for each k value in the report, as well as the cluster information to the heatmaps
3) uploading_metagenes - Short script for extracting features from the NMF results. These are combined with other information, like the type of data the feature belongs to (Global, Phospho, RNA) and the number of data points imputed within that feature prior to running NMF.
1) NMF_helper - added function extract.features, which uses the extractFeatures function from NMF to select the features which most contribute to each metagene.
2) NMF_summary - added Kaplan meier plots for each k value in the report, as well as the cluster information to the heatmaps
3) uploading_metagenes - Short script for extracting features from the NMF results. These are combined with other information, like the type of data the feature belongs to (Global, Phospho, RNA) and the number of data points imputed within that feature prior to running NMF.