Closed djinnome closed 1 year ago
Rhoto_IFO0880_4_14826
is the protein id in RhodoCyc
I believe this originated from an error in interpreting memote output. The false negatives were
EX_succ_e, EX_pro__L_e, EX_for_e, EX_galur_e, EX_gly_e, EX_akg_e
I see. Since the rhodo model can grow on sucrose consistent with the Biolog observation, I think we can close this issue.
On the experimental side, we confirmed both from Pavlo and Biolog that Rhodo can grow on sucrose. On the computational side, we see that RhodoCyc has an invertase enzyme and computational studies identified SUC2 which was confirmed by BLAST analysis to be
@JamesPino if you submit a pull request with the changes, I will review it.