simulate rhodo on those rhodo+ azoto- carbon sources to see if anything it excretes can be ingested by azoto

PNNL-CompBio / CONCERTO

Continuous integration and validation for genome-scale metabolic model consortia

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simulate rhodo on those rhodo+ azoto- carbon sources to see if anything it excretes can be ingested by azoto #70

Open vladpetyuk opened 1 year ago

vladpetyuk commented 1 year ago

Basically this task is about engineering a dependency between rhodo and azoto by manipulating carbon source. The idea is that to provide carbon source that rhodo can consume, but azoto can not. However, rhodo needs to secrete carbon product that can be used as a carbon source by azoto.

djinnome commented 1 year ago

Hi folks,

How close are we to generating suggestions for nutrient dependencies to @PBohutskyi ?