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PNNL-CompBio / coderdata

Automation scripts and benchmark dataset package for cancer drug prediction deep learning models.
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DepMap Dockerfile Failing to build #112

Closed jjacobson95 closed 8 months ago

jjacobson95 commented 8 months ago

The depmap Dockerfile is now failing to build. This can be reproduced locally by running docker build -f build/docker/Dockerfile.depmap . from the repo base dir. Nothing has changed in the repository to cause this failure as far as I can tell. This step has been working for 2 weeks and just began to fail.

The error can be seen here and has the following message during the apt-get install step.

1.101 The following packages have unmet dependencies:
1.171  libssl3t64 : Breaks: libssl3 (< 3.1.5-1.1)
1.175 E: Unable to correct problems, you have held broken packages.

@sgosline have you seen this before?

sgosline commented 8 months ago

I'm guessing something changed in one of the packages, i'll figure it out, it repros on my machine.

jjacobson95 commented 8 months ago

Your change on local_build_script solved this issue.