A general dataset overview that summarizes all datasets at once would be nice.
Maybe a "general" overview at https://pnnl-compbio.github.io/coderdata/datasets/ that then can link to a more detailed description.
I think it would be nice to see at a glance which data types are available in which dataset, especially for someone that is not yet deep in the matter and knows the datasets by heart.
I am thinking something along the lines of a simple table akin to something like this:
Dataset
genes
mutations
proteomics
drug_response
cptac
T
T
T
F
beataml
T
T
T
T
hcmi
T
T
F
F
I understand that there is the functionality of coderdata_object.info() once the data is downloaded and imported but it might be nice to not have to do that prior to getting the data.
sgosline
commented
2 weeks ago
A general dataset overview that summarizes all datasets at once would be nice. Maybe a "general" overview at https://pnnl-compbio.github.io/coderdata/datasets/ that then can link to a more detailed description. I think it would be nice to see at a glance which data types are available in which dataset, especially for someone that is not yet deep in the matter and knows the datasets by heart. I am thinking something along the lines of a simple table akin to something like this:
I understand that there is the functionality of coderdata_object.info() once the data is downloaded and imported but it might be nice to not have to do that prior to getting the data.