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PNNL-CompBio / decomprolute

A suite of scientific workflows to assess metrics to compare efficacy of protein-based tumor deconvolution algorithms.
MIT License
15 stars 4 forks source link

Add in AML specific signatures #186

Closed sgosline closed 1 year ago

sgosline commented 2 years ago

AML does not have standard deconvolution, instead there is a 17 gene stemness signature and some other subtypes https://pubmed.ncbi.nlm.nih.gov/27926740/

and https://www.sciencedirect.com/science/article/pii/S0092867419300947

Creating an issue to add these signatures to a single file and 'signature_matrices' code so we can deconvolve them./

sgosline commented 2 years ago

This could be closed, but i'm still getting an xcell issue.