Notes for SCP combo paper

[bpbond]

• Red maples and oaks blossomed week of 3/24/2019 - (check at GCREW)

• Might want to think, down the line, about getting some e.g. MODIS phenology data

[stephpenn1]

Papers for SP to look at:

• https://nph.onlinelibrary.wiley.com/doi/full/10.1111/j.1469-8137.2012.04102.x
• https://paperpile.com/shared/9Fl3hI
• https://nph.onlinelibrary.wiley.com/doi/full/10.1111/nph.12065
• https://www.actahort.org/books/1222/1222_36.htm

[stephpenn1]

diurnal lag b/w sapflux and soil CO2 flux ??

• factor out T, SM
• Ri ~ Ti + Mi + Fi-?

[bpbond]

I'll do some reading on this topic and be better prepared next time.

[stephpenn1]

^ Me, too!

[bpbond]

https://newonlinecourses.science.psu.edu/stat510/node/74/ https://www.business-science.io/timeseries-analysis/2017/07/30/tidy-timeseries-analysis-pt-3.html https://github.com/hrbrmstr/AnomalyDetection

[stephpenn1]

Sapflow-Rs during drought/dry times

[bpbond]

https://link.springer.com/article/10.1007/s11104-018-3818-z https://www.biogeosciences.net/14/3899/2017/ https://www.sciencedirect.com/science/article/pii/S0038071713003258

[bpbond]

Combined, updated list:

Deciduous Forests: Carbon and Water Fluxes, Balances and Ecophysiological Determinants Granier et al. 2003 https://link.springer.com/chapter/10.1007/978-3-662-05171-9_4 -----> May need to ILL this

Coupling of canopy gas exchange with root and rhizosphere respiration in a semi-arid forest Irvine et al. 2005 https://link.springer.com/article/10.1007/s10533-004-2564-x

Interannual variation in soil CO2 efflux and the response of root respiration to climate and canopy gas exchange in mature ponderosa pine\ Irvine et al. 2008 https://doi.org/10.1111/j.1365-2486.2008.01682.x

Photosynthetic carbon isotope discrimination and its relationship to the carbon isotope signals of stem, soil and ecosystem respiration Wingate et al. 2010 https://doi.org/10.1111/j.1469-8137.2010.03384.x

Transpiration alters the contribution of autotrophic and heterotrophic components of soil CO2 efflux Grossiord et al. 2012 https://doi.org/10.1111/j.1469-8137.2012.04102.x

Influence of repeated canopy scorching on soil CO2 efflux Aubrey et al. 2012 https://doi.org/10.1016/j.foreco.2012.06.041

Ecosystem‐level controls on root‐rhizosphere respiration Hopkins et al. 2013 https://doi.org/10.1111/nph.12271

Stem girdling affects the quantity of CO2 transported in xylem as well as CO2 efflux from soil Bloemen et al. 2013 https://doi.org/10.1111/nph.12568

Ecosystem photosynthesis regulates soil respiration on a diurnal scale with a short-term time lag in a coastal wetland Han et al. 2014 https://doi.org/10.1016/j.soilbio.2013.09.024

Soil water regulates the control of photosynthesis on diel hysteresis between soil respiration and temperature in a desert shrubland Wang et al. 2017 https://www.biogeosciences.net/14/3899/2017/

Canopy photosynthesis modulates soil respiration in a temperate semi-arid shrubland at multiple timescales Jia et al. 2018 https://link.springer.com/article/10.1007/s11104-018-3818-z

The AnomalyDetection R package https://github.com/hrbrmstr/AnomalyDetection

[bpbond]

Talking with Rodrigo Vargas about computing correlations between time series and I think you might too. See Figure 3 here: https://www.nature.com/articles/s41598-019-39663-8

[bpbond]

So let's plan on developing this analysis over next couple months...and a month from now, start an outline on Google Docs?

@stephpenn1 How about you use next couple weeks to re-acquaint yourself with this and plan next steps? And come to our Jan 20 meeting with an analysis plan–i.e. summarize current state (AGU poster), interesting points, and detailed next steps for brainstorming and development?

Supersedes #145