Fetch interaction for only 1 organism

[pidupuis]

Fetch interactions for interactome

Implement the following methods.

• Get query by taxon

  get-query-by-taxon [taxId]
  Returns query filtering interaction for which the taxonomic ID of the two proteins and
  the species is the `taxId` parameter
  Input: 9606
  Output: [:and [:taxidA 9606] [:taxidB 9606] [:species 9606] ]

• Format query in MIQL format

  to-miql [query]
  Returns the query in MIQL format
  Example: [:and [:key1 "value"] [:or [:key2 "value2"] [:key3 "value3"]] ] returns "key1:value and (key2:value2 or key3:value3)"

• Fetch interactions by query

  fetch-by-query [client query]
  Returns result of a query (handling pagination if needed)

[Juleffel]

TaxIDs: 6239: nématode 9606: humain 10090: souris

[Juleffel]

• [x] get-query-by-taxon [taxId] -> e95114581244e07ec55b19331f9d4ec315cbafb1
• [x] to-miql [query] -> ce8e08db33d83ee4b327a84d1dd663c449b38a23
• [x] fetch-by-query [client query] -> f830c1989d968ac65f3c9dbd107d084e46587eb1