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PRBonn / make_it_dense

Make it Dense: Self-Supervised Geometric Scan Completion of Sparse 3D LiDAR Scans in Large Outdoor Environments
https://www.ipb.uni-bonn.de/wp-content/papercite-data/pdf/vizzo2022ral-iros.pdf
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Can not import pyopenvdb after install #5

Closed yininghase closed 1 year ago

yininghase commented 1 year ago

Hello, I'd like to ask maybe a stupid question.

I try to use the openvdb python API in anaconda environment. After running the given command: git clone https://github.com/nachovizzo/openvdb.git -b nacho/fix_background_inactive \ && cd openvdb \ && mkdir build && cd build \ && cmake -DOPENVDB_BUILD_PYTHON_MODULE=ON -DUSE_NUMPY=ON .. \ && sudo make -j$(nproc) all install

It seems to successfully build and install the openvdb. But i can not import pyopenvdb in python. Could you please help me to find out the reason?

The installing logs is as follows:

[ 86%] Built target openvdb_static [ 93%] Built target openvdb_shared [ 95%] Built target vdb_print [100%] Built target pyopenvdb Install the project... -- Install configuration: "Release" -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindBlosc.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindJemalloc.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindIlmBase.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindLog4cplus.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindOpenEXR.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindOpenVDB.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/FindTBB.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/OpenVDBGLFW3Setup.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/OpenVDBHoudiniSetup.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/OpenVDBMayaSetup.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/cmake/OpenVDB/OpenVDBUtils.cmake -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/libopenvdb.a -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/libopenvdb.so.9.0.1 -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/libopenvdb.so.9.0 -- Set runtime path of "/home/stud/may/.local/lib/cmake/OpenVDB//usr/local/lib/libopenvdb.so.9.0.1" to "/usr/local/lib" -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/libopenvdb.so -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/Exceptions.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/Grid.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/Metadata.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/MetaMap.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/openvdb.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/Platform.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/PlatformConfig.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/Types.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/TypeList.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/version.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/Archive.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/Compression.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/DelayedLoadMetadata.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/File.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/GridDescriptor.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/io.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/Queue.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/Stream.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/io/TempFile.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/BBox.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/ConjGradient.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Coord.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/DDA.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/FiniteDifference.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Half.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/HalfLimits.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/LegacyFrustum.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Maps.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Mat.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Mat3.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Mat4.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Math.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Operators.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Proximity.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/QuantizedUnitVec.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Quat.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Ray.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Stats.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Stencils.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Transform.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Tuple.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Vec2.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Vec3.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/math/Vec4.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/AttributeArray.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/AttributeArrayString.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/AttributeGroup.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/AttributeSet.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/IndexFilter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/IndexIterator.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointAdvect.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointAttribute.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointConversion.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointCount.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointDataGrid.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointDelete.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointGroup.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointMask.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointMove.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointSample.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointScatter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/PointStatistics.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/points/StreamCompression.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Activate.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/ChangeBackground.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Clip.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Composite.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Count.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Dense.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/DenseSparseTools.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Diagnostics.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/FastSweeping.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Filter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/FindActiveValues.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/GridOperators.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/GridTransformer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Interpolation.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetAdvect.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetFilter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetFracture.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetMeasure.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetMorph.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetPlatonic.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetRebuild.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetSphere.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetTracker.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/LevelSetUtil.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Mask.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Merge.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/MeshToVolume.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Morphology.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/MultiResGrid.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/NodeVisitor.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/ParticleAtlas.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/ParticlesToLevelSet.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PointAdvect.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PointIndexGrid.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PointPartitioner.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PointScatter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PointsToMask.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PoissonSolver.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/PotentialFlow.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Prune.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/RayIntersector.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/RayTracer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/SignedFloodFill.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/Statistics.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/TopologyToLevelSet.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/ValueTransformer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/VectorTransformer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/VelocityFields.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/VolumeAdvect.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/VolumeToMesh.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tools/VolumeToSpheres.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/InternalNode.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/Iterator.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/LeafBuffer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/LeafManager.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/LeafNode.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/LeafNodeBool.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/LeafNodeMask.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/NodeManager.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/NodeUnion.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/RootNode.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/Tree.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/TreeIterator.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/tree/ValueAccessor.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/CpuTimer.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/ExplicitInstantiation.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/Formats.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/logging.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/MapsUtil.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/Name.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/NodeMasks.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/NullInterrupter.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/PagedArray.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/util/Util.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/thread/Threading.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/python3.8/site-packages/pyopenvdb.so -- Set runtime path of "/home/stud/may/.local/lib/cmake/OpenVDB//usr/local/lib/python3.8/site-packages/pyopenvdb.so" to "/usr/local/lib" -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/include/openvdb/python/pyopenvdb.h -- Installing: /home/stud/may/.local/lib/cmake/OpenVDB/usr/local/bin/vdb_print -- Set runtime path of "/home/stud/may/.local/lib/cmake/OpenVDB//usr/local/bin/vdb_print" to "/usr/local/lib"

nachovizzo commented 1 year ago

Hello, thanks for the interest in the project.

This is why I don't like conda 😂 it never works for me.

Fire up a python shell and see if this path can be seen on the path of whatever interpreter conda is giving to you. If you can't see this path, then you can't import it ;) home/stud/may/.local/lib/cmake/OpenVDB/usr/local/lib/python3.8/site-packages/pyopenvdb.so