Failed to retrieve protein identification: PDH_gi|661893989|emb|CDP02430.1|_0

PRIDE-Archive / pride-curation-scripts

Useful PRIDE Pipelines curation scripts

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Failed to retrieve protein identification: PDH_gi|661893989|emb|CDP02430.1|_0 #34

Closed sureshhewabi closed 4 years ago

sureshhewabi commented 5 years ago

ticket: 1-20191021-27140

sureshhewabi commented 5 years ago

/nfs/pride/work/archive/pg-converter/log/1-20191021-27140/1-20191021-27140_2_validation.report.log
uk.ac.ebi.pride.utilities.data.controller.DataAccessException: Failed to retrieve protein identification: PDH_gi|661893989|emb|CDP02430.1|_0

sureshhewabi commented 5 years ago

There are some FragmentArray records that does not match with number of indexes. In the given example, there are 20 indexed, but only 10 FragmentArray values

Screen Shot 2019-10-23 at 3 12 28 PM

sureshhewabi commented 5 years ago

Software: [Mascot Server,1,2.6.1, No customisations ,{},{}],[Mascot Parser,0,2.6.1.0, No customisations ,{},{}]

sureshhewabi commented 4 years ago

@deeptijk I believe this is sorted out. I will close the issue