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The PRIDE ontology
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Addition of TMT channels to PRIDE controlled vocabulary: 133N, 133C, 134N #70

Closed ostr0103 closed 2 years ago

ostr0103 commented 2 years ago

Hello,

Can you add TMT channels, TMT133N, TMT133C and TMT134N to the accepted TMT labels within the PRIDE controlled vocabulary? I am using a TMT16plex which has additional channels not found in the ontology at this time.

Thank you,

Danielle Weise

ypriverol commented 2 years ago

Already created in #71

ostr0103 commented 2 years ago

Hi Yasset,

I went to submit my SDRF with the 133N, 133C and 134N labels and it still says "invalid SDRF file detected". The error in the log submission is as follows for each of the 3 labels ERROR : Value is not match with ontology', value='tmt133n', row=111, column='comment[label]. I checked the OLS PRIDE controlled vocabulary, and it doesn't show up in the system yet. Is there something I need to do?

Thanks, Danelle

On Sun, Oct 16, 2022 at 12:48 AM Yasset Perez-Riverol < @.***> wrote:

Already created in #71 https://github.com/PRIDE-Utilities/pride-ontology/pull/71

— Reply to this email directly, view it on GitHub https://github.com/PRIDE-Utilities/pride-ontology/issues/70#issuecomment-1279897605, or unsubscribe https://github.com/notifications/unsubscribe-auth/A3S7NFJDEEPXIVYZN7L5AP3WDOJKDANCNFSM6AAAAAAREQG3CU . You are receiving this because you authored the thread.Message ID: @.***>