Overall Statistics panel

PRIDE-Archive / xi-mzidentml-converter

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Overall Statistics panel #29

Closed colin-combe closed 5 months ago

colin-combe commented 7 months ago

Screenshot from 2023-12-08 11-07-41

i think there are issues with this overall statistics panel

not sure that plotting number of species (currently 6, max probably < 100) and e.g. peptides or spectra (will quickly end up in 100,000s) on same plot will work
it can't be read because there's no axes or label (need to rely on tooltip)
what actually encodes the data - the height of the peak or the area under the peak
why does the peak for 'spectra' spread out to 'peptides' and 'species'? Do spectra turn into species?

Just a table would be far more effective. The graphic is pointless?

colin-combe commented 7 months ago

not sure it makes sense to try to compare these things... my thoughts are that this info could be row of numbers at top of page

ypriverol commented 6 months ago

Probably better replace this with the final numbers.

ypriverol commented 5 months ago

I will close this issue until someone arrives with a valid solution proposition.

colin-combe commented 5 months ago

@ypriverol

this info could be row of numbers at top of page

isn't that a valid solution proposition?

ypriverol commented 5 months ago

If you see now the layout, it would be difficult to set the numbers in the last panel. https://www.ebi.ac.uk/pride/archive/crosslinking Unless we add another stats panel we can't recover that solution. if you or @sureshhewabi can recommend another panel, let me know and then we can replace also this.