PRIDE-Archive / xi-mzidentml-converter

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For every protein in PDBDev we should aim to have the list of datasets in crosslinking resource. #42

Closed ypriverol closed 5 months ago

ypriverol commented 6 months ago

The current integration between PRIDE crosslinking data and PDB-dev is from PRIDE crosslinking resources. We also aim a link back from each protein in PDB-Dev to PRIDE datasets. For example:

We will need an API endpoint in the 3dproteomics where datasets can be searched by a given protein accession from uniprot.

sureshhewabi commented 5 months ago

Completed

Example: curl -X 'GET' \ 'https://www.ebi.ac.uk/pride/ws/archive/crosslinking/pdbdev/projects/P00509' \ -H 'accept: application/json'