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PRIDE-Utilities
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ms-data-core-api
Open-source java library to handle different file format standards for proteomics. Specially ms-data-core-api is good for MetaData representation.
Apache License 2.0
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Fix pg converter repo issue
#45
sureshhewabi
closed
5 years ago
0
Fix pg converter repo issue
#44
sureshhewabi
closed
5 years ago
0
Refactor fast mz ident ml validator
#43
sureshhewabi
closed
6 years ago
0
Fast validation integration
#42
sureshhewabi
closed
6 years ago
0
Reformatting and adding tools usage
#41
sureshhewabi
closed
6 years ago
2
Integrate PGconverter tool and MzTabConverterTool
#40
sureshhewabi
closed
6 years ago
4
Review The following methods:
#39
ypriverol
opened
6 years ago
1
Standardising the the modifications to UNIMOD
#38
ypriverol
closed
6 years ago
1
Validating the submissions with rules related with the conversion process to mzTab
#37
ypriverol
opened
6 years ago
0
Validation of new PRIDE Result files should happen in this ms-data-core-api
#36
ypriverol
opened
6 years ago
0
Return the Modifications identified
#35
ypriverol
closed
6 years ago
1
Auto Detect MzIdentML 1.2 file
#34
sureshhewabi
opened
6 years ago
0
optimise for validation of mzIdentML file
#33
sureshhewabi
opened
6 years ago
1
issue reported by Massive team
#32
ypriverol
closed
6 years ago
3
Using this API in MATLAB
#31
kaichengub
opened
6 years ago
1
Question about method MzIdentMLUtils.getSpectrumId
#30
colin-combe
opened
6 years ago
4
Fixed how protein name is tidied.
#29
Tobias-Ternent
closed
7 years ago
0
Caching and proBed fixing
#28
Tobias-Ternent
closed
7 years ago
1
Scanlists and precursors are null
#27
kverhegg
closed
6 years ago
0
Bed conversion updates
#26
mbdebian
closed
7 years ago
1
proBed updates, plus some Java 8 changes
#25
Tobias-Ternent
closed
7 years ago
2
README needs further review
#24
mbdebian
closed
6 years ago
1
The EBI repo is down?
#23
fcyu
closed
8 years ago
4
Issue with Spectrum Reader
#22
ypriverol
closed
6 years ago
7
Issue with massive dataset
#21
ypriverol
closed
8 years ago
0
Failing CI build on Travis
#20
khmarbaise
closed
8 years ago
2
Ms data core api performance
#19
ypriverol
closed
8 years ago
0
New method to check randomly the spectrum references
#18
ypriverol
closed
8 years ago
0
some changes to support OpenMS impl
#17
ypriverol
closed
8 years ago
0
Parsing of some assays seems to hang
#16
KennethVerheggen
closed
6 years ago
2
Travis is failing
#15
ypriverol
closed
8 years ago
1
Compress existing mzml file?
#14
epoyraz
closed
6 years ago
2
CachedDataAccessController.getSpectrumPrecursorCharge(Comparable specId) returns null
#13
fcyu
closed
6 years ago
0
CachedDataAccessController.getSpectrumById() ClassCastException
#12
Tobias-Ternent
opened
8 years ago
3
the netCDF was added to the library
#11
ypriverol
closed
9 years ago
0
Ms data core api performance
#10
ypriverol
closed
9 years ago
0
Added functionality to handle chromosome-level information annotated mzI...
#9
ypriverol
closed
9 years ago
1
Mztab filtering with release branch
#8
ypriverol
closed
9 years ago
0
Mztab filtering
#7
noedelta
closed
9 years ago
0
Error in metadata conversion from mzIdentML to mzTab
#6
ypriverol
closed
9 years ago
1
Develop inference merge
#5
ypriverol
closed
9 years ago
0
Can we add a Controller like the sum of different controllers
#4
ypriverol
closed
6 years ago
0
review protein inference implelemtation for mztab using own cvterms.
#3
ypriverol
closed
6 years ago
0
Create more unit tests
#2
ypriverol
closed
9 years ago
0
Support pride web-services
#1
ypriverol
closed
6 years ago
0