<UNet model for skull stripping and brain masks of PRIME-DE>

[TingsterX]

Resource info table

Name	UNet model for skull stripping and brain masks of anatomical images from PRIME-DE
Authors	Xindi Wang, Ting Xu
Description	The preprocessed brain masks of T1w images for all macaque monkeys from PRIME-DE. A convolutional network - UNet model was used to generate the brain mask for T1w images. The UNet model was initially trained in a large human sample and upgraded with a few macaque data. With a small macaque training sample (N=1-2), the UNet model achieves a decent performance of brain extraction with a minimal processing time (GPU: ~20s, CPU: 2-10 min).
Documentation	UNet model on PRIME-DE
Link	UNet model, code, preprocessed brain masks
Language	python
Publication	In prepartion
Communication	GitHub repo: email: ting.xu @childmind.org
Restrictions	GNU
Category	Brain extraction tool, preprocessed data

• [ ] Do NOT include this resource in periodic mailings about new resources on PRIME-RE

[pcklink]

Thanks Ting! I added it to the structural pipelines for now, but maybe we need to revise our categories at some point...