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PRIME-RE / prime-re.github.io

Open resource exchange platform for non-human primate neuroimaging
https://prime-re.github.io
MIT License
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Metadata sharing #54

Closed collinepoirier closed 3 years ago

collinepoirier commented 3 years ago

Resource info table
Name Metadata sharing
Authors Colline Poirier and Andrew Fox
Description This resource describes recommendations to share metadata to enrich NHP neuroimaging data (what, where and how).
Documentation In progress
Link
Language
Publication
Communication email
Restrictions
Category

Please check the applicable boxes

pcklink commented 3 years ago

Hi Colline, I'm not quite sure what to do with this at the moment. It is posted as a new resource, but doesn't have any content or a link to content. I suspect this is a paper-to-be-(coming out)? If I'd put this online now it doesn't really help users in finding these recommendations, so perhaps we can wait until there is content to refer to?

collinepoirier commented 3 years ago

Hi Chris, Chris Petkov has asked me to create such a page now, in order to put the link in the corresponding publication that will be published in the NeuroImage special issue. The paper is accepted and I have received the uncorrected proof. I think that the idea was to include the link to PRIME-RE webpage in the corrected version of the proof, then to receive the article doi from NeuroImage shortly after, and then to update the description of the resource with the paper reference. Would it be suitable?. Best wishes, Colline

Colline Poirier, PhD Newcastle University Research Fellow Biosciences Institute Medical School Framlington Place NE1 7RU Newcastle-upon-Tyne

Telephone number: 0191 208 8210

From: Chris Klink notifications@github.com Sent: 04 January 2021 18:23 To: PRIME-RE/prime-re.github.io prime-re.github.io@noreply.github.com Cc: Colline Poirier colline.poirier@newcastle.ac.uk; Author author@noreply.github.com Subject: Re: [PRIME-RE/prime-re.github.io] Metadata sharing (#54)

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Hi Colline, I'm not quite sure what to do with this at the moment. It is posted as a new resource, but doesn't have any content or a link to content. I suspect this is a paper-to-be-(coming out)? If I'd put this online now it doesn't really help users in finding these recommendations, so perhaps we can wait until there is content to refer to?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://github.com/PRIME-RE/prime-re.github.io/issues/54#issuecomment-754135898, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ASEVBI74PZDLKGBYYITOJHLSYIBRXANCNFSM4VTIKMFQ.

pcklink commented 3 years ago

Ah, I see. I think I talked about this with Chris P. What we could is create a page similar to what I did for the 'Head-cap' paper (here) but whether this is suitable and where it should be located (url-wise) will somewhat depend on content. My best guess would be that it would be suitable to list it under the 'Protocols & Experimental Design' header on the Hardware & Protocols page as 'Metadata sharing' and have that link to a dedicated page here, which is now still empty. You can link to that page in the paper if you want, although it would be safer to refer to the root https://prime-re.github.io since these 'protocol resources' are only starting to get established and a reorganization may at some point be necessary. Will that work?

collinepoirier commented 3 years ago

Hi, Yes, that would work. I will reference the PRIME-RE root webpage in the manuscript. Could you please let me know how I can update the metadata sharing page in the future? Thanks. Best wishes, Colline

Colline Poirier, PhD Newcastle University Research Fellow Biosciences Institute Medical School Framlington Place NE1 7RU Newcastle-upon-Tyne

Telephone number: 0191 208 8210

From: Chris Klink notifications@github.com Sent: 04 January 2021 18:48 To: PRIME-RE/prime-re.github.io prime-re.github.io@noreply.github.com Cc: Colline Poirier colline.poirier@newcastle.ac.uk; Author author@noreply.github.com Subject: Re: [PRIME-RE/prime-re.github.io] Metadata sharing (#54)

⚠ External sender. Take care when opening links or attachments. Do not provide your login details.

Ah, I see. I think I talked about this with Chris P. What we could is create a page similar to what I did for the 'Head-cap' paper (herehttps://prime-re.github.io/hardware_and_protocols/protective_headcap.html) but whether this is suitable and where it should be located (url-wise) will somewhat depend on content. My best guess would be that it would be suitable to list it under the 'Protocols & Experimental Design' header on the Hardware & Protocols pagehttps://prime-re.github.io/hardware as 'Metadata sharing' and have that link to a dedicated page herehttps://prime-re.github.io/hardware_and_protocols/metadata_sharing.html, which is now still empty. You can link to that page in the paper if you want, although it would be safer to refer to the root https://prime-re.github.io since these 'protocol resources' are only starting to get established and a reorganization may at some point be necessary. Will that work?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHubhttps://github.com/PRIME-RE/prime-re.github.io/issues/54#issuecomment-754148482, or unsubscribehttps://github.com/notifications/unsubscribe-auth/ASEVBI7AP4CODJ4HFB65K6DSYIEPFANCNFSM4VTIKMFQ.

pcklink commented 3 years ago

The easiest way to update is probably to provide content in this (or a new) issue and one of the PRIME-RE team members can transfer it to the page (which currently exist but is not linked anywhere on the website.

Alternatively you can directly edit the page on GitHub using a pull request, but this seems a little bit more involved.

pcklink commented 3 years ago

Done