PRIME-RE / prime-re.github.io

Open resource exchange platform for non-human primate neuroimaging
https://prime-re.github.io
MIT License
17 stars 7 forks source link

<Cross-species alignment (macaque-human)> #55

Closed TingsterX closed 3 years ago

TingsterX commented 3 years ago

Resource info table

Name Cross-species alignment (macaque-human)
Authors Ting Xu, Karl-Heinz Nenning
Description This repo includes 1) landmarks for the macaque-human alignment, 2) functional phylogenetic map (functional connectivity homology index) between macaque and human, 3) evolutional surface area expansion (macaque-to-human), 4) cross-species parcellations (human-to-macaque: Glasser2016, Yeo2011, Broadmann parcellations on the macaque surfaces; macaque-to-human: Markov2014 and Broadmann parcellations on human HCP surface, and 5) human (Human Connectome Project [HCP]) and macaque (MacaqueYerkes19) surfaces
Documentation replace this with a link to more extensive documentation
Link https://github.com/TingsterX/alignment_macaque-human
Language shell, workbench
Publication Xu, Nenning et al., 2020
Communication GitHub profile or email
Restrictions Please cite the above publication and the github repo https://github.com/TingsterX/alignment_macaque-human
Category template/atlas/cross-species-comparison <

Please check the applicable boxes

Instructions

Please fill out the table above as completely as possible, i.e. replace the complete str > .... < with your information. Then submit it as a new issue and tag the issue with all applicable (yellow) categorical tags to specify what type of resource you are contributing. We will use this table and these tags to add your resource to the main list.

Name

Provide a name for your resource. Try to make it a bit descriptive, but as long as it as not incredibly offensive, we will allow it.

Authors

Who wrote the resource or deserves to be credited? This would be a good place to list them.

Description

Tell the community what it is that your resource does. Keep it concise (a few lines).

Documentation

Does your resource include instructions on how to use it, and if so, where? This can be a hyperlink, or you can simply state that it can be found through the main link (e.g., because it's in a GitHub ReadMe.md). Jupyter Notebooks or richly annotated scripts would be great, but any documentation would be great.

Link

Provide a link to the resource. This can be a link to a GitHub repository, website, or shared file. If you don't already have your resource hosted somewhere and would like to have it hosted on this GitHub, tell us and provide us with a link to the resource (Dropbox, Google Drive, WeTransfer, etc)

Language

What language (e.g., python, shell, matlab, etc) is your resource in? This will help people to look at solutions in languages they are familiar with first. We will accept anything.

Associated publications (if available)

If your resource is a published method, you can link to the paper here.

Communication

How can a potential user get in contact with the submitter/author of the resource? Is there a Slack or Mattermost channel? Can issues be opened on a GitHub repo? Is there an email adress? If you want to submit your resource 'as-is' and not offer any means for communication you can also mention that.

Restrictions

Are there any limitations for how the analysis method can be used (e.g., citation or acknowledgement required, etc)?

Category

What is the most suitable category to list your resource under?

Checkboxes

Please indicate whether ethical approval was acquired for activities related to the development of this resource, or whether this wasn't necessary. Also, indicate if you do not want your resource advertised in sparsely sent updates from the PRIME-RE team to the community.

pcklink commented 3 years ago

Thanks. This opens up a new 'cross-species' resource category! I added it to the repo/page and also crosslinked from the templates/atlasses page.