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Term issue: pmk1 Q92398 #209

Closed ValWood closed 4 years ago

ValWood commented 4 years ago

pmk1 Q92398

phosphorylated form T186,Y188 and unphosphorylated form 

refs PMID:10365961 PMID:17761528

Thanks

nataled commented 4 years ago

Hi Val,

Terms are ready:

Phos: PR:000050471 spm1/Phos:(T186,Y188) UnPhos: PR:000050472 spm1/UnPhos:(T186,Y188)

[Term] id: PR:000050471 name: mitogen-activated protein kinase spm1 phosphorylated 1 (Schizosaccharomyces pombe) def: "A mitogen-activated protein kinase spm1 (Schizosaccharomyces pombe) that has been phosphorylated on residues equivalent to Thr-186 and Tyr-188 of the amino acid sequence represented by UniProtKB:Q92398. Example: UniProtKB:Q92398, Thr-186, MOD:00047|Tyr-188, MOD:00048." [PRO:DAN, PomBase:VW, PMID:10365961, PMID:17761528] comment: Category=organism-modification. Requested by=PomBase. synonym: "Spom-spm1/Phos:1" EXACT PRO-short-label [PRO:DAN] synonym: "UniProtKB:Q92398, Thr-186, MOD:00047|Tyr-188, MOD:00048" NARROW PRO-proteoform-std [PRO:DAN] is_a: PR:000050470 ! mitogen-activated protein kinase spm1 (Schizosaccharomyces pombe) relationship: has_part MOD:00047 ! O-phospho-L-threonine relationship: has_part MOD:00048 ! O-phospho-L-tyrosine relationship: only_in_taxon NCBITaxon:4896 ! Schizosaccharomyces pombe

[Term] id: PR:000050472 name: mitogen-activated protein kinase spm1 unphosphorylated 1 (Schizosaccharomyces pombe) def: "A mitogen-activated protein kinase spm1 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Thr-186 and Tyr-188 of the amino acid sequence represented by UniProtKB:Q92398. Example: UniProtKB:Q92398, Thr-186/Tyr-188, PR:000026291." [PRO:DAN, PomBase:VW, PMID:10365961, PMID:17761528] comment: Category=organism-modification. Requested by=PomBase. synonym: "Spom-spm1/UnPhos:1" EXACT PRO-short-label [PRO:DAN] synonym: "UniProtKB:Q92398, Thr-186/Tyr-188, PR:000026291" NARROW PRO-proteoform-std [PRO:DAN] is_a: PR:000050470 ! mitogen-activated protein kinase spm1 (Schizosaccharomyces pombe) relationship: only_in_taxon NCBITaxon:4896 ! Schizosaccharomyces pombe

ValWood commented 4 years ago

Sorry. I need to check this first. I searched for Sty1 in the tracker and didn't find anything.

What is the best way to look up if modifications already exist, Sorry I think I knew this but I forgot