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Term issue: Dis2 modified form #233

Closed ValWood closed 3 years ago

ValWood commented 3 years ago

dis2 T319 P13681 modified residue T316 added by cdc2 added during mitotic metaphase | IDA | Yamano H et al. (1994) modified residue T316 added by cdk9 | IDA | Parua PK et al. (2018)

nataled commented 3 years ago

Hi Val,

I'm assuming that 'T319' is a typo? If so, your requested term is:

PR:000050483: dis2/Phos(T316)

[Term] id: PR:000050483 name: serine/threonine-protein phosphatase PP1-1 phosphorylated 1 (Schizosaccharomyces pombe) def: "A serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-316 of the amino acid sequence represented by UniProtKB:P13681. Example: UniProtKB:P13681, Thr-316, MOD:00047." [PRO:DAN, PomBase:VW, PMID:29899453, PMID:7957097] comment: Category=organism-modification. Requested by=PomBase. synonym: "Spom-dis2/Phos:1" EXACT PRO-short-label [PRO:DAN] synonym: "UniProtKB:P13681, Thr-316, MOD:00047" NARROW PRO-proteoform-std [PRO:DAN] is_a: PR:000050482 ! serine/threonine-protein phosphatase PP1-1 (Schizosaccharomyces pombe) relationship: has_part MOD:00047 ! O-phospho-L-threonine relationship: only_in_taxon NCBITaxon:4896 ! Schizosaccharomyces pombe

ValWood commented 3 years ago

Thanks for correctly interpreting!

ValWood commented 3 years ago

OK, for this one I actually needed the unphosphorylated T316 (this is the active from that dephosphorylates Spt5

ValWood commented 3 years ago

I see I am not allowed to re-open. I'll transfer to a new ticket.

nataled commented 3 years ago

No need to worry about re-opening, as comments on closed tickets works just fine. In any case, since you already opened a new ticket, I'll re-close this one and handle things there.