SIMEX docker

[CFGrote]

We need to update the docker images for simex. The goal is to install simex on a cloud instance of jupyter hub (hosted on DESY's cloud servers). We also have to demonstrate that simex / vinyl example notebooks can be run on binder.

• [ ] move dependencies in top level cmake file to the Modules that actually cause these dependencies.
• [ ] Document better how modules can be selected/deselected.
• [ ] Image for master
• [ ] Image for develop
• [ ] repo2docker script
• [ ] at image build time, user should be able to select/deselect the modules he/she/* wants included in the image.

Useful contacts: Thomas Kluyver (XFEL, WP4), Michael Schuh (DESY, expands)

[JunCEEE]

I know that Thomas has tried working on it. I will ask Thomas about the status and work with him.

[JunCEEE]

Any suggestions about priority? @CFGrote Which one should have a higher priority? Documentation or this one?

[CFGrote]

documentation

-- Dr. Carsten Fortmann-Grote PaNOSC WP5 leader

On 6/11/20 5:51 PM, Juncheng E wrote:

Any suggestions about priority? @CFGrote https://github.com/CFGrote Which one should have a higher priority? Documentation https://github.com/PaNOSC-ViNYL/ViNYL-project/issues/22 or this one?

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[CFGrote]

f5ab754 enabled installation via conda: 1) create a conda environment with

$> conda env create -n simex --file environment.yml
$> conda activate simex

2) install all libs into $CONDA_PREFIX with

$> ./install.sh conda

3) finally install the simex library

$> cd Sources/python
$> python -m pip install .

[CFGrote]

@JunCEEE @cloudbustinguk, what is the status here? can we close this one?

[cloudbustinguk]

AFAIK this can be closed - will wait for @JunCEEE to confirm.

[JunCEEE]

This can be closed.