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PacificBiosciences / FALCON-integrate

Mostly deprecated. See https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
https://github.com/PacificBiosciences/FALCON/wiki/Manual
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Falcon installation stop at the last step with make error #169

Closed chunlinxiao closed 6 years ago

chunlinxiao commented 6 years ago

Not sure why the installation stops here with "make Error 2" (the choice of installation is virtualenv).

Do you have any idea? thanks

Installed /net/intdev/varpipe01/varpipe/chunlin/falcon/FALCON-integrate/pypeFLOW

Successfully installed decorator-4.2.1 future-0.16.0 networkx-1.11 pypeflow Cleaning up... make[2]: Leaving directory /net/intdev/varpipe01/varpipe/chunlin/falcon/FALCON-integrate/FALCON-make' make[1]: *** [all] Error 2 make[1]: Leaving directory/net/intdev/varpipe01/varpipe/chunlin/falcon/FALCON-integrate/FALCON-make' make: *** [all] Error 2

chunlinxiao commented 6 years ago

this was caused by lack of nim - okay after nim installation.