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PacificBiosciences / FALCON

FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries
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Is there an estimate of running time? #44

Closed yunfeiguo closed 9 years ago

yunfeiguo commented 9 years ago

Dear Dr. Chin,

Is there a way in Falcon to estimate running time? We are running Falcon on a large data set for several days. I think it should have been done based on previous analyses, but it's stilling running (if you use 'top' on compute nodes, you can see DALIGNER is working). Even an estimate on number of remaining jobs would be helpful.

Thanks!

Best, Yunfei

pb-jchin commented 9 years ago

@yunfeiguo , some discussion happens here https://github.com/PacificBiosciences/FALCON/issues/46, I will mark this issue to be duplicate of that. Please join there for discussion.