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PacificBiosciences / HiFiTargetEnrichment

A repo for the Twist HiFi capture/snakemake workflow
BSD 3-Clause Clear License
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WhatsHap v1.1 library deprecated #8

Open MeHelmy opened 6 months ago

MeHelmy commented 6 months ago

https://github.com/PacificBiosciences/HiFiTargetEnrichment/blob/0946f7493ec1cf5fbe75bba17aedf7733b019778/rules/envs/whatshap.yaml#L6

The function scipy.stats.binom_test() was removed from SciPy 1.12.0 which is used by WhatsHap v1.1 I suggest updating it to v1.4 and it will work.