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PacificBiosciences / apps-scripts

Miscellaneous scripts for applications of PacBio systems
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Is this tool available for ONT data? #11

Open dnarna2108 opened 9 months ago

dnarna2108 commented 9 months ago

Hi,

I'm wondering if I can analyze ONT sequencing data using RepeatAnalysisTools.

I'm planning to generate a waterfall plot of the mapped reads.

I also have a consensus sequence (*.fa) file for the repeat expansion and normal allele.

Thank you.

jrharting commented 9 months ago

as this is largely been deprecated and there are no specific blocks to using anything other than PacBio data, I don't think this would be an issue for anyone. use at your own risk :)