Closed franlat closed 1 year ago
I think I already know what happened. I think I had one of the other conda environment activated when I launched the snakemake command that messed with the diamond version and didn't allow for the correct one to be loaded.
I'm closing this because it was a mistake on my part!
Pipeline: HiFi-MAG-Pipeline Issue: Error in Checkm2ContigAnalysis step after downloading CheckM2 database. I am assuming based on the log file that the checkm2 database diamond version does not match with the diamond version installed in the conda environment. Perhaps I can download another version of the database (or construct it myself)?
Here is the snippet from the std error:
And the log file for
BL_0902.Checkm2ContigAnalysis.log
: