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PacificBiosciences / pbbioconda

PacBio Secondary Analysis Tools on Bioconda. Contains list of PacBio packages available via conda.
BSD 3-Clause Clear License
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Primrose not listed in the table? #593

Closed scorreard closed 1 year ago

scorreard commented 1 year ago

Hi team,

Is primrose not supported anymore? It is not available in the table, and I cannot find it on conda anymore.

Thanks,

Solenne

armintoepfer commented 1 year ago

We are going to release a new 5mC caller soon. Stay tuned!

scorreard commented 1 year ago

This is exciting, but was it necessary to remove primrose in the meantime? That put many of my analysis to a hard stop.

May I have more details about soon? Are we talking hours? days? If it is more than days, I will have to inform my coworkers that the analysis will be delayed.

armintoepfer commented 1 year ago

You can get our tools in the meantime via the official SMRTlink bundle https://www.pacb.com/support/software-downloads/

armintoepfer commented 1 year ago

https://github.com/PacificBiosciences/jasmine

scorreard commented 1 year ago

Thank you!