I'm a fresh man in bioinformatics, i dont know how to solve Error in java , Is there any way to solve my ERROR information.
I install by bioconda jasmine ,but I meet the follow problem
I use jasmine ccs.bam test1.bam -j 1 --log-level INFO
''' ERROR StatusLogger No log4j2 configuration file found. Using default configuration: logging only errors to the console.
21:05:44.957 [main] ERROR - error parsing parameters::
org.apache.commons.cli.UnrecognizedOptionException: Unrecognized option: -j
Exception in thread "main" java.lang.NullPointerException
at uio.amg.zhong.jasmine.JASMINE.findXMLfile(JASMINE.java:494)
at uio.amg.zhong.jasmine.JASMINE.main(JASMINE.java:40)'''
I'm a fresh man in bioinformatics, i dont know how to solve Error in java , Is there any way to solve my ERROR information. I install by bioconda jasmine ,but I meet the follow problem I use
jasmine ccs.bam test1.bam -j 1 --log-level INFO
''' ERROR StatusLogger No log4j2 configuration file found. Using default configuration: logging only errors to the console. 21:05:44.957 [main] ERROR - error parsing parameters:: org.apache.commons.cli.UnrecognizedOptionException: Unrecognized option: -j Exception in thread "main" java.lang.NullPointerException at uio.amg.zhong.jasmine.JASMINE.findXMLfile(JASMINE.java:494) at uio.amg.zhong.jasmine.JASMINE.main(JASMINE.java:40)'''