I got the error 'Segmentation fault (core dumped)' when installing ilma.
(pacbio) [jialh@amdnode3 MM_10Plex_42MB_SEQUENCING_DATA_EXPRESS2.0]$ mamba install bioconda::lima
Looking for: ['bioconda::lima']
conda-forge/linux-64 Using cache
conda-forge/noarch Using cache
bioconda/linux-64 Using cache
bioconda/noarch Using cache
bioconda/linux-64 Using cache
bioconda/noarch Using cache
pkgs/main/noarch No change
pkgs/main/linux-64 No change
pkgs/r/linux-64 No change
pkgs/r/noarch No change
lima: overriding channel, version and build from installed packages due to --force-reinstall.
Pinned packages:
- python 2.7.*
Transaction
Prefix: /home1/jialh/tools/anaconda3/envs/mamba/envs/pacbio
Updating specs:
- bioconda::lima
Package Version Build Channel Size
─────────────────────────────────────────────────────
Reinstall:
─────────────────────────────────────────────────────
o lima 2.9.0 h9ee0642_1 bioconda Cached
Summary:
Reinstall: 1 packages
Total download: 0 B
─────────────────────────────────────────────────────
Confirm changes: [Y/n] Y
Downloading and Extracting Packages:
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
(pacbio) [jialh@amdnode3 MM_10Plex_42MB_SEQUENCING_DATA_EXPRESS2.0]$ lima
Segmentation fault (core dumped)
(pacbio) [jialh@amdnode3 MM_10Plex_42MB_SEQUENCING_DATA_EXPRESS2.0]$ python
Python 2.7.15 | packaged by conda-forge | (default, Mar 5 2020, 14:56:06)
[GCC 7.3.0] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> exit()
(pacbio) [jialh@amdnode3 MM_10Plex_42MB_SEQUENCING_DATA_EXPRESS2.0]$ cat /proc/version
Linux version 3.10.0-1062.el7.x86_64 (mockbuild@kbuilder.bsys.centos.org) (gcc version 4.8.5 20150623 (Red Hat 4.8.5-36) (GCC) ) #1 SMP Wed Aug 7 18:08:02 UTC 2019
I got the error 'Segmentation fault (core dumped)' when installing ilma.