could the TRGT work with assembly data derived from HiFi reads? - Githubissues

PacificBiosciences / trgt

Tandem repeat genotyping and visualization from PacBio HiFi data

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could the TRGT work with assembly data derived from HiFi reads? #31

Open WeiYang-BAI opened 4 months ago

WeiYang-BAI commented 4 months ago

Hi, could the TRGT work with assembly data derived from HiFi reads?

Best regards,

egor-dolzhenko commented 4 months ago

Thanks for the question! TRGT is not designed to work with assemblies, however we have other options you could explore. Let's connect by email to discuss this if you are interested?