[Feature] Add 3D msd dataset support

PaddleCV-SIG / MedicalSeg

MedicalSeg is an easy-to-use 3D medical image segmentation toolkit that supports the whole segmentation process. Specially, We provide data preprocessing acceleration, high precision model on COVID-19 CT scans dataset and MRISpineSeg spine dataset, and a 3D visualization demo based on itkwidgets.

Apache License 2.0

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[Feature] Add 3D msd dataset support #50

Closed linhandev closed 2 years ago

linhandev commented 2 years ago

添加3D msd数据集的预处理。在msd task 2 3 6 7 8 9 10上进行了测试

示例：

python tools/prepare_msd.py 4

shiyutang commented 2 years ago

添加3D msd数据集的预处理。在msd task 2 3 6 7 8 9 10上进行了测试

示例：
python tools/prepare_msd.py 4 

对于1, 4, 5 有测试吗

linhandev commented 2 years ago

添加3D msd数据集的预处理。在msd task 2 3 6 7 8 9 10上进行了测试示例：
python tools/prepare_msd.py 4 
对于1, 4, 5 有测试吗

上述3d都测过，刚测了task 1的4d修了一个小问题。正在重新全跑一遍，但是感觉需要很长时间。准备更新wrapop之后上多进程加一下速