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PaddlePaddle / PaddleHelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
Apache License 2.0
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Installation without docker container #138

Open MUCDK opened 2 years ago

MUCDK commented 2 years ago

Hey, Great paper! Could you please provide instructions of how to install paddlepaddle without docker containers?

Thanks a lot!

SuperXiang commented 2 years ago

Hi there,

Thanks for your interest. You can refer to this link (https://www.paddlepaddle.org.cn/documentation/docs/en/install/index_en.html) for the detailed installation instruction of paddlepaddle. If you want to install paddlehelix, you can go here for the details.

Hope this will help!

MUCDK commented 2 years ago

Hi, Thank you very much for your response. I tried to replicate the instructions but still run into the error

RuntimeError: (PreconditionNotMet) Cannot load cudnn shared library. Cannot invoke method cudnnGetVersion. [Hint: cudnn_dso_handle should not be null.] (at /paddle/paddle/fluid/platform/dynload/cudnn.cc:59)

It seems like several users have had this issue. Unfortunately, most solutions suggested are in Chinese. Would it be possible to direct to an English solution?

Thank you very much!

Noisyntrain commented 2 years ago

Hi there, This error seems to be because the paddle cannot find the cudnn library, you may try to include your cudnn library path to the environment variable LD_LIBRARY_PATH and test the code. In this similar issue, I think he/she successfully solve the problem by include the cuda path to the enviroment variable. Hope this can be helpful to you.