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Pandora-IsoMemo / base-image

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Update rver to 4.3.2 #5

Open jan-abel-inwt opened 2 weeks ago

jan-abel-inwt commented 2 weeks ago

see https://github.com/Pandora-IsoMemo/base-image/issues/4

jan-abel-inwt commented 1 week ago

There is a Problem with the BMSC Package with the new R Version. The Compilation fails. The error message is unfortunately not very helpful.

make: *** [/usr/lib/R/etc/Makeconf:202: stanExports_linReg.o] Error 1

@mgross I assume you are the author of BMSC. Do you have any ideas on how to fix this issue?

jan-abel-inwt commented 1 week ago

Note:

  1. rstantools::rstan_config()
  2. re-build & re-compile package via devtools::load_all()
#!> git status
On branch test/use-make_cc
Changes not staged for commit:
  (use "git add <file>..." to update what will be committed)
  (use "git restore <file>..." to discard changes in working directory)
    modified:   R/stanmodels.R
    modified:   src/BMSC.so
    modified:   src/Makevars
    modified:   src/RcppExports.cpp
    modified:   src/RcppExports.o
    modified:   src/stanExports_linReg.cc
    modified:   src/stanExports_linReg.h
    modified:   src/stanExports_linReg.o
    modified:   src/stanExports_linRegHorseShoe.cc
    modified:   src/stanExports_linRegHorseShoe.h
    modified:   src/stanExports_linRegHorseShoe.o
jan-abel-inwt commented 1 week ago

The update worked for all apps, except of OsteoBioR. Here we have to re-generate the cpp code too.